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Add --output-dir and [processing].output_dir so encoded files can be
written to an existing output directory without replacing, moving, or
deleting originals.
Preserve input paths below the output directory, avoid overwriting
existing outputs with numeric suffixes, and keep --backup-dir compatible
with --output-dir.
Update finalization, backup, and size-report handling so replacement
mode and output-dir mode share the same output path flow.
Document the new mode in the README and man page, add bash completion
for the new option, and expand the size report schema with input and
output paths.
Closes #7.
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Reorganize CLI options into matching sections across help output,
README, man page, and bash completion.
Split input, encoding, skip, processing, size report, display, and
general options so related flags are easier to find and the documented
order matches the parser more closely.
Add --no-config to the README and man page while updating bash
completion order to follow the new help structure.
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Add the function keyword to shell function definitions across the main
script, developer scripts, and bash completion file.
This makes function declarations visually consistent throughout the
project and easier to scan without changing behavior.
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Initialize bash completion with -n = so --option=value forms keep the
equals sign as part of the current word.
This fixes completion for long options that take values with equals
syntax, where pressing Tab after --option= previously failed to offer
value completions.
Update the manual sourcing hint to match the renamed .sh completion
file.
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Rename the bash completion script to use a .sh extension so its file
type is clearer in editors and tooling.
Keep the completion contents unchanged while making the filename
consistent with the script-style files in the repository.
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